Contact information

Sampsa Hautaniemi, Prof.

Biomedicum Helsinki, B524b
P.O.Box 63 (Haartmaninkatu 8)
00014 UNIVERSITY OF HELSINKI
phone +358 2941 25419

firstname.lastname@helsinki.fi

Twitter @HautaniemiLab


Affiliations

 

Members of the lab

Hautaniemi lab

Photo from the lab coding camp, summer 2016.

viiva

sampsa

Sampsa Hautaniemi
Professor of Systems Biology

Homepage

CV

rainer Rainer Lehtonen
PhD, Senior scientist
in collaboration with Prof. Lauri Aaltonen
antti

Antti Häkkinen
DSc, postdoctoral fellow

My work involves developing statistical methods for analysis and integration of ovarian cancer data at multiple levels to suggest efficient combinatorial treatments.

Jaana

Jaana Oikkonen
PhD, postdoctoral fellow

I'm focusing on genetic analyses and tumor evolution.

ville

Ville Rantanen
PhD, postdoctoral fellow

My research interests are in automated image processing and analysis. My main tool is the in-house developed Anima bundle. Currently only consulting as needed.

amjad

Amjad Alkodsi
MSc (Systems Biology), PhD student in ILS

My project involves drug sensitivity prediction for cancer samples.


Julia

Julia Casado
MSc (Bioinformatics), PhD student in DPBM

My main interest is on the molecular mechanisms that characterize cell resistance to chemotherapy. My research is focused on proteomics studies coupled with high-throughput analysis of NGS data and public repositories, such as TCGA and ENCODE.

alejandra

Alejandra Cervera
MSc (Bioinformatics), PhD student in DPBM

My project focuses on RNA-seq analysis.

chiara

Chiara Facciotto
MSc (Bioinformatics), PhD student

My project focuses on an analysis of epigenetic changes in ER+ MCF-7 breast cancer cells at different time points after estradiol stimulus.

Vellu

Veli-Matti Isoviita
MD, PhD student

Currently assessing ovarian cancer patients' clinical data and developing ways to use it with genetic analyses.

emilia

Emilia Kozlowska
MSc (bioinformatics), PhD student

My current projects focus on mathematical modeling to understand treatment resistance in ovarian cancer.

Kaiyang

Kaiyang Zhang
MSc (Systems Biology), PhD student

My project focuses on the single-cell RNA-seq data analysis of ovarian cancer.

Mikko

Mikko Kivikoski
MSc student (Evolutionary biology)

My project focuses on evolution of tumor and competition between different cell linages.

Juulia

Juulia Heikkinen
Medical student

My project focuses on ctDNA analysis.

Lauri

Lauri Lapatto
Medical student

My current project is focussed on combined analysis of ovarian cancer tumour and cell line RNA-Seq data.

Juha

Juha Koiranen
BSc student

I'm implementing, integrating and evaluating tools for data analysis and visualization.

Kari

Kari Lavikka
BSc student (Biology)

I am working on data visualization.

Erika

Erika Ojanperä
BSc student (Bioinformation technology)

I am working on the Annitator database.

Kari

Ingrid Schulman
BSc student (Bioinformation technology)

My project is about finding ways to detect copy number variations in ctDNA.

Tiia Pelkonen
MA (English Translation and Interpreting)

Project manager for HERCULES, and administrative coordinator of the CoE in Cancer Genetics Research.