Cancer and Control of Genomic Integrity (CANGENIN)

 

 

 

 

 

 

 

 

 

 

 

Publications

Joint Publications 2011 – March 2012 (two or more CANGENIN PIs)
  1. Erdélyi P, Borsos E, Takács-Vellai K, Kovács T, Kovács AL, Sigmond T, Hargitai B, Pásztor L, Sengupta T, Dengg M, Pécsi I, Tóth J, Nilsen H, Vértessy BG, Vellai T. Shared developmental roles and transcriptional control of autophagy and apoptosis in Caenorhabditis elegans. J Cell Sci. 2011 May 1;124(Pt 9):1510-8.
  2. Jørgensen S, Eskildsen M, Fugger K, Hansen L, Larsen MS, Kousholt AN, Syljuåsen RG, Trelle MB, Jensen ON, Helin K, Sørensen CS. SET8 is degraded via PCNA-coupled CRL4(CDT2) ubiquitylation in S phase and after UV irradiation. J Cell Biol. 2011 Jan 10;192(1):43-54.
  3. Küntziger T, Landsverk HB, Collas P, Syljuåsen RG. Protein phosphatase 1 regulators in DNA damage signaling. Cell Cycle. 2011 May 1;10(9):1356-62.
  4. Menzel T, Nähse-Kumpf V, Kousholt AN, Klein DK, Lund-Andersen C, Lees M, Johansen JV, Syljuåsen RG, Sørensen CS. A genetic screen identifies BRCA2 and PALB2 as key regulators of G2 checkpoint maintenance. EMBO Rep. 2011 Jul 1;12(7):705-12.
  5. Murga M, Campaner S, Lopez-Contreras AJ, Toledo LI, Soria R, Montaña MF, D'Artista L, Schleker T, Guerra C, Garcia E, Barbacid M, Hidalgo M, Amati B, Fernandez-Capetillo O. Exploiting oncogene-induced replicative stress for the selective killing of Myc-driven tumors. Nat Struct Mol Biol. 2011 Nov 27;18(12):1331-5.
  6. Sideridou M, Zakopoulou R, Evangelou K, Liontos M, Kotsinas A, Rampakakis E, Gagos S, Kahata K, Grabusic K, Gkouskou K, Trougakos IP, Kolettas E, Georgakilas AG, Volarevic S, Eliopoulos AG, Zannis-Hadjopoulos M, Moustakas A, Gorgoulis VG. Cdc6 expression represses E-cadherin transcription and activates adjacent replication origins. J Cell Biol. 2011 Dec 26;195(7):1123-40.
  7. Sørensen CS, Syljuåsen RG. Safeguarding genome integrity: the checkpoint kinases ATR, CHK1 and WEE1 restrain CDK activity during normal DNA replication. Nucleic Acids Res. 2012 Jan;40(2):477-86.
  8. Ugland H, Naderi S, Brech A, Collas P, Blomhoff HK. cAMP induces autophagy via a novel pathway involving ERK, cyclin E and Beclin 1. Autophagy. 2011 Oct;7(10):1199-211.

Publications 2011 – March 2012

  1. Aanes H, Winata CL, Lin CH, Chen JP, Srinivasan KG, Lee SG, Lim AY, Hajan HS, Collas P, Bourque G, Gong Z, Korzh V, Aleström P, Mathavan S. Zebrafish mRNA sequencing deciphers novelties in transcriptome dynamics during maternal to zygotic transition. Genome Res. 2011 Aug;21(8):1328-38.
  2. Abdallah QM, Phillips RM, Johansson F, Helleday T, Cosentino L, Abdel-Rahman H, Etzad J, Wheelhouse RT, Kiakos K, Bingham JP, Hartley JA, Patterson LH, Pors K. Minor structural modifications to alchemix influence mechanism of action and pharmacological activity. Biochem Pharmacol. 2012 Jun 1;83(11):1514-22.
  3. Adams D, Altucci L, Antonarakis SE, Ballesteros J, Beck S, Bird A, Bock C, Boehm B, Campo E, Caricasole A, Dahl F, Dermitzakis ET, Enver T, Esteller M, Estivill X, Ferguson-Smith A, Fitzgibbon J, Flicek P, Giehl C, Graf T, Grosveld F, Guigo R, Gut I, Helin K, Jarvius J, Küppers R, Lehrach H, Lengauer T, Lernmark A, Leslie D, Loeffler M, Macintyre E, Mai A, Martens JH, Minucci S, Ouwehand WH, Pelicci PG, Pendeville H, Porse B, Rakyan V, Reik W, Schrappe M, Schübeler D, Seifert M, Siebert R, Simmons D, Soranzo N, Spicuglia S, Stratton M, Stunnenberg HG, Tanay A, Torrents D, Valencia A, Vellenga E, Vingron M, Walter J, Willcocks S. BLUEPRINT to decode the epigenetic signature written in blood. Nat Biotechnol. 2012 Mar 7;30(3):224-6.
  4. Al-Assar O, Mantoni T, Lunardi S, Kingham G, Helleday T, Brunner TB Breast cancer stem-like cells show dominant homologous recombination due to a larger S-G2 fraction. Cancer Biol Ther. 2011 Jun 15;11(12):1028-35.
  5. Al-Halabi R, Bou Chedid M, Abou Merhi R, El-Hajj H, Zahr H, Schneider-Stock R, Bazarbachi A, Gali-Muhtasib H. Gallotannin inhibits NFĸB signaling and growth of human colon cancer xenografts. Cancer Biol Ther. 2011 Jul 1;12(1):59-68. doi: 10.4161/cbt.12.1.15715.
  6. Al-Ubaidi FL, Schultz N, Egevad L, Granfors T, Helleday T. Castration therapy of prostate cancer results in downregulation of HIF-1α levels.Int J Radiat Oncol Biol Phys. 2012 Mar 1;82(3):1243-8.
  7. Alvarez-Fernández M, Halim VA, Aprelia M, Laoukili J, Mohammed S, Medema RH. Protein phosphatase 2A (B55α) prevents premature activation of forkhead transcription factor FoxM1 by antagonizing cyclin A/cyclin-dependent kinase-mediated phosphorylation. J Biol Chem. 2011 Sep 23;286(38):33029-36.
  8. Alvarez-Fernández M, Medema RH, Lindqvist A. Transcriptional regulation underlying recovery from a DNA damage-induced arrest. Transcription. 2010 Jul-Aug;1(1):32-5.
  9. Andersen IS, Ostrup O, Lindeman LC, Aanes H, Reiner AH, Mathavan S, Aleström P, Collas P. Epigenetic complexity during the zebrafish mid-blastula transition. Biochem Biophys Res Commun. 2012 Jan 27;417(4):1139-44.
  10. Anderton JA, Bose S, Vockerodt M, Vrzalikova K, Wei W, Kuo M, Helin K, Christensen J, Rowe M, Murray PG, Woodman CB. The H3K27me3 demethylase, KDM6B, is induced by Epstein-Barr virus and over-expressed in Hodgkin's Lymphoma. Oncogene. 2011 Apr 28;30(17):2037-43.
  11. Andjelkovic T, Bankovic J, Stojsic J, Milinkovic V, Podolski-Renic A, Ruzdijic S, Tanic N. Coalterations of p53 and PTEN tumor suppressor genes in non-small cell lung carcinoma patients. Transl Res. 2011 Jan;157(1):19-28.
  12. Anensen N, Hjelle SM, Van Belle W, Haaland I, Silden E, Bourdon JC, Hovland R, Taskén K, Knappskog S, Lønning PE, Bruserud O, Gjertsen BT. Correlation analysis of p53 protein isoforms with NPM1/FLT3 mutations and therapy response in acute myeloid leukemia. Oncogene. 2012 Mar 22;31(12):1533-45.
  13. Angelova S, Spassova S, Toshkov S, Shivarov V. Chromosomal translocation
    t(9;22)(p24;q11) appears to be recurrently associated with myeloid malignancy
    with aggressive course. Leuk Lymphoma. 2011 Sep;52(9):1809-10.
  14. Angelova S, Zechev J, Stoimenov A, Spassov B, Romanova M, Shivarov V. A novel
    t(7;21)(q32;q22) translocation disrupting the RUNX1 gene in an adult patient with
    acute myeloid leukemia. Leuk Lymphoma. 2011 Dec;52(12):2396-8.
  15. Arczewska KD, Baumeier C, Kassahun H, Sengupta T, Bjørås M, Kuśmierek JT, Nilsen H. Caenorhabditis elegans NDX-4 is a MutT-type enzyme that contributes to genomic stability. DNA Repair (Amst). 2011 Feb 7;10(2):176-87
  16. Asselin-Labat ML, Sutherland KD, Vaillant F, Gyorki DE, Wu D, Holroyd S, Breslin K, Ward T, Shi W, Bath ML, Deb S, Fox SB, Smyth GK, Lindeman GJ, Visvader JE. Gata-3 negatively regulates the tumor-initiating capacity of mammary luminal progenitor cells and targets the putative tumor suppressor caspase-14. Mol Cell Biol. 2011 Nov;31(22):4609-22.
  17. Antonelou MH, Kriebardis AG, Stamoulis KE, Trougakos IP, Papassideri IS. Apolipoprotein J/clusterin in human erythrocytes is involved in the molecular process of defected material disposal during vesiculation.PLoS One. 2011;6(10):e26033.
  18. Antonelou MH, Kriebardis AG, Stamoulis KE, Trougakos IP, Papassideri IS. Apolipoprotein J/Clusterin is a novel structural component of human erythrocytes and a biomarker of cellular stress and senescence. PLoS One. 2011;6(10):e26032
  19. Bailly A, Gartner A. Germ cell apoptosis and DNA damage responses, in “The C elegans germ line”, Springer press, 2012, in press.
  20. Bajbouj K, Mawrin C, Hartig R, Schulze-Luehrmann J, Wilisch-Neumann A, Roessner A, Schneider-Stock R. P53-dependent antiproliferative and pro-apoptotic effects of trichostatin A (TSA) in glioblastoma cells. J Neurooncol. 2012 May;107(3):503-16.
  21. Band AM, Laiho M. Crosstalk of TGF-β and estrogen receptor signaling in breast cancer. J Mammary Gland Biol Neoplasia. 2011 Jun;16(2):109-15.
  22.  Band AM, Laiho M. SnoN oncoprotein enhances estrogen receptor-α transcriptional activity. Cell Signal. 2012 Apr;24(4):922-30.
  23. Bao W, Chen M, Zhao X, Kumar R, Spinnler C, Thullberg M, Issaeva N, Selivanova G, Stromblad S. PRIMA-1 (Met) /APR-246 induces wild-type p53-dependent suppression of malignant melanoma tumor growth in 3D culture and in vivo. Cell Cycle. 2011 Jan 15;10(2):301-7.
  24. Bartek J, Lukas J. DNA repair: Cyclin D1 multitasks. Nature. 2011 Jun 8;474(7350):171-2.
  25. Bauerschmidt C, Woodcock M, Stevens DL, Hill MA, Rothkamm K, Helleday T. Cohesin phosphorylation and mobility of SMC1 at ionizing radiation-induced DNA double-strand breaks in human cells. Exp Cell Res. 2011 Feb 1;317(3):330-7.
  26. Beider K, Begin M, Abraham M, Wald H, Weiss ID, Wald O, Pikarsky E, Zeira E, Eizenberg O, Galun E, Hardan I, Engelhard D, Nagler A, Peled A. CXCR4 antagonist 4F-benzoyl-TN14003 inhibits leukemia and multiple myeloma tumor growth. Exp Hematol. 2011 Mar;39(3):282-92.
  27. Beli P, Lukashchuk N, Wagner SA, Weinert BT, Olsen JV, Baskcomb L, Mann M, Jackson SP, Choudhary C. Proteomic Investigations Reveal a Role for RNA Processing Factor THRAP3 in the DNA Damage Response. Mol Cell. 2012 Mar 14. [Epub ahead of print]
  28. Benderska N, Chakilam S, Hugle M, Ivanovska J, Gandesiri M, Schulze-Lührmann J, Bajbouj K, Croner R, Schneider-Stock R. Apoptosis Signalling Activated by TNF in the Lower Gastrointestinal Tract - Review. Curr Pharm Biotechnol. 2011 May 24. [Epub ahead of print]
  29. Bereshchenko O, Mancini E, Luciani L, Gambardella A, Riccardi C, Nerlov C. Pontin is essential for murine hematopoietic stem cell survival. Haematologica. 2012 Feb 27. [Epub ahead of print]
  30. Beyer U, Dobbelstein M. Non-hominid TP63 lacks retroviral LTRs but contains a novel conserved upstream exon. Cell Cycle. 2011 Jun 15;10(12):1905-11.
  31. Beyer U, Moll-Rocek J, Moll UM, Dobbelstein M. Endogenous retrovirus drives hitherto unknown proapoptotic p63 isoforms in the male germ line of humans and great apes. Proc Natl Acad Sci U S A. 2011 Mar 1;108(9):3624-9.
  32. Blandino G, Deppert W, Hainaut P, Levine A, Lozano G, Olivier M, Rotter V, Wiman K, Oren M. Mutant p53 protein, master regulator of human malignancies: a report on the Fifth Mutant p53 Workshop. Cell Death Differ. 2012 Jan;19(1):180-3
  33.  Blasco MA, Serrano M, Fernandez-Capetillo O. Genomic instability in iPS: time for a break. EMBO J. 2011 Mar 16;30(6):991-3.
  34. Blasius M, Forment JV, Thakkar N, Wagner SA, Choudhary C, Jackson SP. A phospho-proteomic screen identifies substrates of the checkpoint kinase Chk1. Genome Biol. 2011 Aug 18;12(8):R78.
  35. Bogurcu N., Sevimli-Gur C., Ozmen B., Bedir E., Korkmaz K.S., ALCAPs induce mitochondrial apoptosis and activate DNA damage response by generating ROS and inhibiting topoisomerase I enzyme activity in K562 leukemia cell line. Biochem Biophys Res Commun. 2011 Jun 17;409(4):738-44.
  36. Borsos E, Erdélyi P, Vellai T. Autophagy and apoptosis are redundantly required for C. elegans embryogenesis. Autophagy. 2011 May;7(5):557-9.
  37. Boulay G, Dubuissez M, Van Rechem C, Forget A, Helin K, Ayrault O, Leprince D. Hypermethylated in Cancer 1 (HIC1) Recruits Polycomb Repressive Complex 2 (PRC2) to a Subset of Its Target Genes through Interaction with Human Polycomb-like (hPCL) Proteins. J Biol Chem. 2012 Mar 23;287(13):10509-24.
  38. Bouwman P, Drost R, Klijn C, Pieterse M, van der Gulden H, Song JY, Szuhai K, Jonkers J. Loss of p53 partially rescues embryonic development of Palb2 knockout mice but does not foster haploinsufficiency of Palb2 in tumour suppression. J Pathol. 2011 May;224(1):10-21.
  39. Brand S, Teich R, Dicke T, Harb H, Yildirim AÖ, Tost J, Schneider-Stock R, Waterland RA, Bauer UM, von Mutius E, Garn H, Pfefferle PI, Renz H. Epigenetic regulation in murine offspring as a novel mechanism for transmaternal asthma protection induced by microbes. J Allergy Clin Immunol. 2011 Sep;128(3):618-25.e1-7.
  40. Brennan DJ, O'Connor DP, Laursen H, McGee SF, McCarthy S, Zagozdzon R, Rexhepaj E, Culhane AC, Martin FM, Duffy MJ, Landberg G, Ryden L, Hewitt SM, Kuhar MJ, Bernards R, Millikan RC, Crown JP, Jirström K, Gallagher WM. The cocaine- and amphetamine-regulated transcript mediates ligand-independent activation of ERα, and is an independent prognostic factor in node-negative breast cancer. Oncogene. 2011 Dec 5. doi: 10.1038/onc.2011.519
  41. Bug M, Dobbelstein M. Anthracyclines induce the accumulation of mutant p53 through E2F1-dependent and -independent mechanisms. Oncogene. 2011 Aug 18;30(33):3612-24.
  42. Blasius M, Forment JV, Thakkar N, Wagner SA, Choudhary C, Jackson SP. A phospho-proteomic screen identifies substrates of the checkpoint kinase Chk1. Genome Biol. 2011 Aug 18;12(8):R78.
  43. Bogurcu N., Sevimli-Gur C., Ozmen B., Bedir E., Korkmaz K.S., ALCAPs induce mitochondrial apoptosis and activate DNA damage response by generating ROS and inhibiting topoisomerase I enzyme activity in K562 leukemia cell line. Biochem Biophys Res Commun. 2011 Jun 17;409(4):738-44.
  44. Borsos E, Erdélyi P, Vellai T. Autophagy and apoptosis are redundantly required for C. elegans embryogenesis. Autophagy. 2011 May;7(5):557-9.
  45. Boulay G, Dubuissez M, Van Rechem C, Forget A, Helin K, Ayrault O, Leprince D. Hypermethylated in Cancer 1 (HIC1) Recruits Polycomb Repressive Complex 2 (PRC2) to a Subset of Its Target Genes through Interaction with Human Polycomb-like (hPCL) Proteins. J Biol Chem. 2012 Mar 23;287(13):10509-24.
  46. Bouwman P, Drost R, Klijn C, Pieterse M, van der Gulden H, Song JY, Szuhai K, Jonkers J. Loss of p53 partially rescues embryonic development of Palb2 knockout mice but does not foster haploinsufficiency of Palb2 in tumour suppression. J Pathol. 2011 May;224(1):10-21.
  47. Brand S, Teich R, Dicke T, Harb H, Yildirim AÖ, Tost J, Schneider-Stock R, Waterland RA, Bauer UM, von Mutius E, Garn H, Pfefferle PI, Renz H. Epigenetic regulation in murine offspring as a novel mechanism for transmaternal asthma protection induced by microbes. J Allergy Clin Immunol. 2011 Sep;128(3):618-25.e1-7.
  48. Brennan DJ, O'Connor DP, Laursen H, McGee SF, McCarthy S, Zagozdzon R, Rexhepaj E, Culhane AC, Martin FM, Duffy MJ, Landberg G, Ryden L, Hewitt SM, Kuhar MJ, Bernards R, Millikan RC, Crown JP, Jirström K, Gallagher WM. The cocaine- and amphetamine-regulated transcript mediates ligand-independent activation of ERα, and is an independent prognostic factor in node-negative breast cancer. Oncogene. 2011 Dec 5. doi: 10.1038/onc.2011.519
  49. Bug M, Dobbelstein M. Anthracyclines induce the accumulation of mutant p53 through E2F1-dependent and -independent mechanisms. Oncogene. 2011 Aug 18;30(33):3612-24.
  50. Bunting SF, Callen E, Kozak ML, Kim JM, Wong N, Lopez-Contreras AJ, Ludwig T, Baer R, Faryabi RB, Malhowski A, Chen HT, Fernandez-Capetillo O, D'Andrea A, Nussenzweig A. BRCA1 Functions Independently of Homologous Recombination in DNA Interstrand Crosslink Repair. Mol Cell. 2012 Mar 20. [Epub ahead of print]
  51. Campaner S, Amati B. Two sides of the Myc-induced DNA damage response: from tumor suppression to tumor maintenance. Cell Div. 2012 Feb 28;7(1):6.
  52. Campaner S, Spreafico F, Burgold T, Doni M, Rosato U, Amati B, Testa G. The methyltransferase Set7/9 (Setd7) is dispensable for the p53-mediated DNA damage response in vivo. Mol Cell. 2011 Aug 19;43(4):681-8.
  53. Chandler I, Houlston R, Landberg G. A practical guide to constructing and using tissue microarrays. Methods Mol Biol. 2011;675:363-73.
  54. Chatzakos V, Slätis K, Djureinovic T, Helleday T, Hunt MC. N-Acyl Taurines are Anti-Proliferative in Prostate Cancer Cells. Lipids. 2012 Apr;47(4):355-61.
  55.  Chawla R, Redon S, Raftopoulou C, Wischnewski H, Gagos S, Azzalin CM. Human UPF1 interacts with TPP1 and telomerase and sustains telomere leading-strand replication. EMBO J. 2011 Aug 9;30(19):4047-58
  56. Chau YY, Brownstein D, Mjoseng H, Lee WC, Buza-Vidas N, Nerlov C, Jacobsen SE, Perry P, Berry R, Thornburn A, Sexton D, Morton N, Hohenstein P, Freyer E, Samuel K, van't Hof R, Hastie N. Acute multiple organ failure in adult mice deleted for the developmental regulator Wt1. PLoS Genet. 2011 Dec;7(12):e1002404.
  57. Cheng F, Pekkonen P, Laurinavicius S, Sugiyama N, Henderson S, Günther T, Rantanen V, Kaivanto E, Aavikko M, Sarek G, Hautaniemi S, Biberfeld P, Aaltonen L, Grundhoff A, Boshoff C, Alitalo K, Lehti K, Ojala PM. KSHV-initiated notch activation leads to membrane-type-1 matrix metalloproteinase-dependent lymphatic endothelial-to-mesenchymal transition. Cell Host Microbe. 2011 Dec 15;10(6):577-90.
  58. Chilov D, Sinjushina N, Rita H, Taketo MM, Mäkelä TP, Partanen J. Phosphorylated β-catenin localizes to centrosomes of neuronal progenitors and is required for cell polarity and neurogenesis in developing midbrain. Dev Biol. 2011 Sep 1;357(1):259-68.
  59. Choi S, Toledo LI, Fernandez-Capetillo O, Bakkenist CJ. CGK733 does not inhibit ATM or ATR kinase activity in H460 human lung cancer cells. DNA Repair (Amst). 2011 Oct 10;10(10):1000-1.
  60. Christodoulou A, Kostakis IK, Kourafalos V, Pouli N, Marakos P, Trougakos IP, Tsitsilonis OE. Design, synthesis and antiproliferative activity of novel aminosubstituted benzothiopyranoisoindoles. Bioorg Med Chem Lett. 2011 May 15;21(10):3110-2.
  61. Ciampricotti M, Hau CS, Doornebal CW, Jonkers J, de Visser KE. Chemotherapy response of spontaneous mammary tumors is independent of the adaptive immune system. Nat Med. 2012 Mar 6;18(3):344-6.
  62. Ciampricotti M, Vrijland K, Hau CS, Pemovska T, Doornebal CW, Speksnijder EN, Wartha K, Jonkers J, de Visser KE. Development of metastatic HER2(+) breastcancer is independent of the adaptive immune system. J Pathol. 2011 May;224(1):56-66.
  63. Collas P. A chromatin immunoprecipitation protocol for small cell numbers. Methods Mol Biol. 2011;791:179-93.
  64. Collas P. Notice of redundant publication. Nuclear reprogramming in cell-free extracts. Philos Trans R Soc Lond B Biol Sci. 2011 Nov 12;366(1581):3162.
  65. Craig AL, Moser SC, Bailly AP, Gartner A. Methods for studying the DNA damage response in the Caenorhabdatis elegans germ line. Methods Cell Biol. 2012;107:321-52.
  66. Daniels M, Lurkin I, Pauli R, Erbstösser E, Hildebrandt U, Hellwig K, Zschille U, Lüders P, Krüger G, Knolle J, Stengel B, Prall F, Hertel K, Lobeck H, Popp B, Theissig F, Wünsch P, Zwarthoff E, Agaimy A, Schneider-Stock R. Spectrum of KIT/PDGFRA/BRAF mutations and Phosphatidylinositol-3-Kinase pathway gene alterations in gastrointestinal stromal tumors (GIST). Cancer Lett. 2011 Dec 15;312(1):43-54.
  67. de Jong J, de Ridder J, van der Weyden L, Sun N, van Uitert M, Berns A, van Lohuizen M, Jonkers J, Adams DJ, Wessels LF. Computational identification of insertional mutagenesis targets for cancer gene discovery. Nucleic Acids Res. 2011 Aug;39(15):e105.
  68. del Barco Barrantes I, Coya JM, Maina F, Arthur JS, Nebreda AR. Genetic analysis of specific and redundant roles for p38alpha and p38beta MAPKs during mouse development. Proc Natl Acad Sci U S A. 2011 Aug 2;108(31):12764-9.
  69. del Barco Barrantes I, Nebreda AR. Roles of p38 MAPKs in invasion and metastasis. Biochem Soc Trans. 2012 Feb 1;40(1):79-84.
  70. Dereli-Öz A, Versini G, Halazonetis TD. Studies of genomic copy number changes in human cancers reveal signatures of DNA replication stress.Mol Oncol. 2011 Aug;5(4):308-14
  71. Derksen PW, Braumuller TM, van der Burg E, Hornsveld M, Mesman E, Wesselin J, Krimpenfort P, Jonkers J. Mammary-specific inactivation of E-cadherin and p53 impairs functional gland development and leads to pleomorphic invasive lobular carcinoma in mice. Dis Model Mech. 2011 May;4(3):347-58.
  72. de Schepper J, Rasmussen MH, Gucev Z, Eliakim A, Battelino T. Long-acting pegylated human GH in children with GH deficiency: a single-dose, dose-escalation trial investigating safety, tolerability, pharmacokinetics and pharmacodynamics. Eur J Endocrinol. 2011 Sep;165(3):401-9
  73. Devgan SS, Sanal O, Doil C, Nakamura K, Nahas SA, Pettijohn K, Bartek J, Lukas C, Lukas J, Gatti RA. Homozygous deficiency of ubiquitin-ligase ring-finger protein RNF168 mimics the radiosensitivity syndrome of ataxia-telangiectasia. Cell Death Differ. 2011 Sep;18(9):1500-6.
  74. DeWeese, T.L. and Laiho, M. (Editors) Molecular Determinants of Radiation Response. Springer, New York, NY. 2011, ISBN 978-1-4419-8043-4, 276 pages.
  75. Dimitrova P, Vassilev T, Shivarov V. Inhibition or overactivation of AICDA to
    eliminate pathologic B cell clones? Comment on the article by Hsu et al.
    Arthritis Rheum. 2011 Oct;63(10):3174-5; author reply 3175-7
  76. Domínguez-Kelly R, Martín Y, Koundrioukoff S, Tanenbaum ME, Smits VA, Medema RH, Debatisse M, Freire R. Wee1 controls genomic stability during replication by regulating the Mus81-Eme1 endonuclease. J Cell Biol. 2011 Aug 22;194(4):567-79.
  77. Doubravska L, Krausova M, Gradl D, Vojtechova M, Tumova L, Lukas J, Valenta T, Pospichalova V, Fafilek B, Plachy J, Sebesta O, Korinek V. Fatty acid modification of Wnt1 and Wnt3a at serine is prerequisite for lipidation at cysteine and is essential for Wnt signalling. Cell Signal. 2011 May;23(5):837-48.
  78. Dreher A, Rossing M, Kaczkowski B, Andersen DK, Larsen TJ, Christophersen MK, Nielsen FC, Norrild B. Differential expression of cellular microRNAs in HPV 11, -16, and -45 transfected cells. Biochem Biophys Res Commun. 2011 Aug 19;412(1):20-5.
  79. Drost R, Bouwman P, Rottenberg S, Boon U, Schut E, Klarenbeek S, Klijn C, van der Heijden I, van der Gulden H, Wientjens E, Pieterse M, Catteau A, Green P, Solomon E, Morris JR, Jonkers J. BRCA1 RING function is essential for tumorsuppression but dispensable for therapy resistance. Cancer Cell. 2011 Dec 13;20(6):797-809.
  80. Edrei Y, Gross E, Corchia N, Tsarfaty G, Galun E, Pappo O, Abramovitch R. Vascular profile characterization of liver tumors by magnetic resonance imaging using hemodynamic response imaging in mice. Neoplasia. 2011 Mar;13(3):244-53.
  81. Elvers I, Johansson F, Groth P, Erixon K, Helleday T. UV stalled replication forks restart by re-priming in human fibroblasts. Nucleic Acids Res. 2011 Sep 1;39(16):7049-57
  82. Emamzadah S, Tropia L, Halazonetis TD. Crystal structure of a multidomain human p53 tetramer bound to the natural CDKN1A (p21) p53-response element. Mol Cancer Res. 2011 Nov;9(11):1493-9.
  83. Erbaykent-Tepedelen B., Özmen B., Varisli L., Gonen-Korkmaz C., Debelec-Butuner B., Syed M.H., Yilmazer-Cakmak O., Korkmaz K.S., NKX3.1 contributes to S phase entry and regulates DNA damage response (DDR) in prostate cancer cell lines. Biochem Biophys Res Commun. 2011 Sep 12; 414 (1):123-128
  84. Ermakova O, Piszczek L, Luciani L, Cavalli FM, Ferreira T, Farley D, Rizzo S, Paolicelli RC, Al-Banchaabouchi M, Nerlov C, Moriggl R, Luscombe NM, Gross C. Sensitized phenotypic screening identifies gene dosage sensitive region on chromosome 11 that predisposes to disease in mice. EMBO Mol Med. 2011 Jan;3(1):50-66.
  85. Fandridis E, Apergis G, Korres DS, Nikolopoulos K, Zoubos AB, Papassideri I, Trougakos IP. Increased expression levels of apolipoprotein J/clusterin during primary osteoarthritis. In Vivo. 2011 Sep-Oct;25(5):745-9.
  86. Farkas IJ, Korcsmáros T, Kovács IA, Mihalik Á, Palotai R, Simkó GI, Szalay KZ, Szalay-Beko M, Vellai T, Wang S, Csermely P. Network-based tools for the identification of novel drug targets. Sci Signal. 2011 May 17;4(173):pt3.
  87. Ferk F, Chakraborty A, Jäger W, Kundi M, Bichler J, Mišík M, Wagner KH, Grasl-Kraupp B, Sagmeister S, Haidinger G, Hoelzl C, Nersesyan A, Dušinská M, Simić T, Knasmüller S. Potent protection of gallic acid against DNA oxidation: results of human and animal experiments. Mutat Res. 2011 Oct 1;715(1-2):61-71.
  88. Flott S, Kwon Y, Pigli YZ, Rice PA, Sung P, Jackson SP. Regulation of Rad51 function by phosphorylation. EMBO Rep. 2011 Jul 8;12(8):833-9.
  89. Follin-Arbelet V, Hofgaard PO, Hauglin H, Naderi S, Sundan A, Blomhoff R, Bogen B, Blomhoff HK. Cyclic AMP induces apoptosis in multiple myeloma cells and inhibits tumor development in a mouse myeloma model. BMC Cancer. 2011 Jul 18;11:301.
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  290. Tasic V, Lozanovski VJ, Gucev Z, Blau N, Cheong HI, Sayer JA. Failure to thrive and nephrolithiasis in a boy with congenital cyanotic heart anomaly. Pediatr Nephrol. 2011 Dec;26(12):2153-7
  291. Thanasoula M, Escandell J and Tarsounas M. 2011. ATM/ATR checkpoint activation downregulates CDC25C to prevent mitotic entry with uncapped telomeres. J. Cell Biol, 2012, in press.
  292. Thiel A, Narko K, Heinonen M, Hemmes A, Tomasetto C, Rio MC, Haglund C, Mäkelä TP, Ristimäki A. Inhibition of cyclooxygenase-2 causes regression of gastric adenomas in trefoil factor 1 deficient mice. Int J Cancer. 2011 Oct 27. doi: 10.1002/ijc.27331. [Epub ahead of print]
  293. Tkacz-Stachowska K, Lund-Andersen C, Velissarou A, Myklebust JH, Stokke T, Syljuåsen RG.The amount of DNA damage needed to activate the radiation-induced G2 checkpoint varies between single cells. Radiother Oncol. 2011 Oct;101(1):24-7.
  294. Tobin NP, Sims AH, Lundgren KL, Lehn S, Landberg G. Cyclin D1, Id1 and EMT in breast cancer. BMC Cancer. 2011 Sep 28;11:417.
  295. Toledo LI, Murga M, Fernandez-Capetillo O. Targeting ATR and Chk1 kinases for cancer treatment: a new model for new (and old) drugs. Mol Oncol. 2011 Aug;5(4):368-73.
  296. Toledo LI, Murga M, Zur R, Soria R, Rodriguez A, Martinez S, Oyarzabal J, Pastor J, Bischoff JR, Fernandez-Capetillo O. A cell-based screen identifies ATR inhibitors with synthetic lethal properties for cancer-associated mutations. Nat Struct Mol Biol. 2011 Jun;18(6):721-7
  297. Tsykunova G, Reikvam H, Ahmed AB, Nepstad I, Gjertsen BT, Bruserud O. Targeting of polo-like kinases and their cross talk with Aurora kinases - possible therapeutic strategies in human acute myeloid leukemia? Expert Opin Investig Drugs. 2012 Mar 17. [Epub ahead of print]
  298. Udd L, Mäkelä TP. LKB1 signaling in advancing cell differentiation. Fam Cancer. 2011 Sep;10(3):425-35.
  299. Urbin SS, Elvers I, Hinz JM, Helleday T, Thompson LH. Uncoupling of RAD51 focus formation and cell survival after replication fork stalling in RAD51D null CHO cells. Environ Mol Mutagen. 2012 Mar;53(2):114-24
  300. Vaahtomeri K, Mäkelä TP. Molecular mechanisms of tumor suppression by LKB1. FEBS Lett. 2011 Apr 6;585(7):944-51.
  301. Vallenius T, Vaahtomeri K, Kovac B, Osiceanu AM, Viljanen M, Mäkelä TP. An association between NUAK2 and MRIP reveals a novel mechanism for regulation of actin stress fibers. J Cell Sci. 2011 Feb 1;124(Pt 3):384-93.
  302. van Miltenburg MH, Jonkers J. Using genetically engineered mouse models to validate candidate cancer genes and test new therapeutic approaches. Curr Opin Genet Dev. 2012 Feb;22(1):21-7.
  303. Varisli L, Gonen-Korkmaz C, Syed HM, Bogurcu N, Debelec-Butuner B, Erbaykent-Tepedelen B, Korkmaz KS. Androgen regulated HN1 leads proteosomal degradation of androgen receptor (AR) and negatively influences AR mediated transactivation in prostate cells. Mol Cell Endocrinol. 2012 Mar 5;350(1):107-17.
  304. Varisli L., Korkmaz-Gonen C., Tepedelen-Erbaykent B., Debelec-Butuner, Syed Muhammed H., Bogurcu N., Saatcioglu F., Korkmaz K.S., Ubiqutiously expressed HN1 down-regulates Akt mediated GSK3beta signaling, and its knockdown results with deregulated G2/M transition in prostate cells. DNA and Cell Biol. 2011 Jun;30(6):419-29.
  305. Várkuti BH, Yang Z, Kintses B, Erdélyi P, Bárdos-Nagy I, Kovács AL, Hári P, Kellermayer M, Vellai T, Málnási-Csizmadia A. A novel actin binding site of myosin required for effective muscle contraction. Nat Struct Mol Biol. 2012 Feb 12;19(3):299-306.
  306. Vassos N, Agaimy A, Schlabrakowski A, Hohenberger W, Schneider-Stock R, Croner RS. An unusual and potentially misleading phenotypic change in a primary gastrointestinal stromal tumour (GIST) under imatinib mesylate therapy. Virchows Arch. 2011 Mar;458(3):363-9.
  307. Vilborg A, Bersani C, Wilhelm MT, Wiman KG. The p53 target Wig-1: a regulator of mRNA stability and stem cell fate? Cell Death Differ. 2011 Sep;18(9):1434-40.
  308. Vilborg, A., Bersani, B., Wickström, M.,  Segerström, L., Kogner, P., and Wiman, K.G. Wig-1, a novel regulator of N-Myc mRNA and N-Myc-driven tumor growth. Cell Death & Disease, 2012, in press.
  309. Vischioni B, Nicolay NH, Sharma RA, Helleday T. Inhibitors of DNA repair and response to ionising radiation. In: Molecular Determinants of Radiation Response, Current Cancer Research, DeWeese TL and Laiho M, Editors. Springer, 2011, pp.143-171.
  310. Vollebergh MA, Jonkers J, Linn SC. Genomic instability in breast and ovarian cancers: translation into clinical predictive biomarkers. Cell Mol Life Sci. 2012 Jan;69(2):223-45.
  311. Wang F, Yin Y, Ye X, Liu K, Zhu H, Wang L, Chiourea M, Okuka M, Ji G, Dan J, Zuo B, Li M, Zhang Q, Liu N, Chen L, Pan X, Gagos S, Keefe DL, Liu L. Molecular insights into the heterogeneity of telomere reprogramming in induced pluripotent stem cells. Cell Res. 2012 Apr;22(4):757-68.
  312. Warmoes M, Jaspers JE, Pham TV, Piersma SR, Oudgenoeg G, Massink MP, Waisfisz Q, Rottenberg S, Boven E, Jonkers J, Jimenez CR. Proteomics of mouse BRCA1-deficient mammary tumors identifies DNA repair proteins with diagnostic and prognostic value in human breast cancer. Mol Cell Proteomics. 2012 Feb 24. [Epub ahead of print]
  313. Weiss ID, Shoham H, Wald O, Wald H, Beider K, Abraham M, Barashi N, Galun E, Nagler A, Peled A. Ccr5 deficiency regulates the proliferation and trafficking of natural killer cells under physiological conditions. Cytokine. 2011 Jun;54(3):249-57.
  314. Williams K, Christensen J, Helin K. DNA methylation: TET proteins-guardians of CpG islands?
  315. Williams K, Christensen J, Helin K. DNA methylation: TET proteins-guardians of CpG islands? EMBO Rep. 2011 Dec 23;13(1):28-35.
  316. Williams K, Christensen J, Pedersen MT, Johansen JV, Cloos PA, Rappsilber J, Helin K. TET1 and hydroxymethylcytosine in transcription and DNA methylation fidelity. Nature. 2011 May 19;473(7347):343-8.
  317. Wilsker D, Chung JH, Pradilla I, Petermann E, Helleday T, Bunz F. Targeted mutations in the ATR pathway define agent-specific requirements for cancer cell growth and survival. Mol Cancer Ther. 2012 Jan;11(1):98-107.
  318. Wirfält E, Li C, Manjer J, Ericson U, Sonestedt E, Borgquist S, Landberg G, Olsson H, Gullberg B. Food sources of fat and sex hormone receptor status of invasive breast tumors in women of the Malmö Diet and Cancer cohort. Nutr Cancer. 2011;63(5):722-33
  319. Ying S, Hamdy FC, Helleday T. Mre11-dependent degradation of stalled DNA replication forks is prevented by BRCA2 and PARP1. Cancer Res. 2012 Mar 23. [Epub ahead of print]
  320. Zandi R, Selivanova G, Christensen CL, Gerds TA, Willumsen BM, Poulsen HS. PRIMA-1Met/APR-246 induces apoptosis and tumor growth delay in small cell lung cancer expressing mutant p53. Clin Cancer Res. 2011  May 1;17(9):2830-41.
  321. Zawacka-Pankau J, Grinkevich VV, Hunten S, Nikulenkov F, Gluch A, Li H, Enge M, Kel A, Selivanova G. Inhibition of glycolytic enzymes mediated by pharmacologically activated p53: targeting Warburg effect to fight cancer. J Biol Chem.  2011 Dec 2;286(48):41600-15.
  322. Zhang N, Wei P, Gong A, Chiu WT, Lee HT, Colman H, Huang H, Xue J, Liu M, Wang Y, Sawaya R, Xie K, Yung WK, Medema RH, He X, Huang S. FoxM1 promotes β-catenin nuclear localization and controls Wnt target-gene expression and glioma tumorigenesis. Cancer Cell. 2011 Oct 18;20(4):427-42.
  323. Zhang Z, Yang Z, Jäämaa S, Liu H, Pellakuru LG, Iwata T, af Hällström TM, De Marzo AM, Laiho M. Differential epithelium DNA damage response to ATM and DNA-PK pathway inhibition in human prostate tissue culture. Cell Cycle. 2011 Oct 15;10(20):3545-53.
  324. Zhao H, Dobrucki J, Rybak P, Traganos F, Dorota Halicka H, Darzynkiewicz Z. Induction of DNA damage signaling by oxidative stress in relation to DNA replication as detected using "click chemistry". Cytometry A. 2011 Nov;79(11):897-902.
  325. Zhao H, Li J, Traganos F, Halicka HD, Zarebski M, Dobrucki J, Darzynkiewicz Z. Cell fixation in zinc salt solution is compatible with DNA damage response detection by phospho-specific antibodies. Cytometry A. 2011 Jun;79(6):470-6.
  326. Zubik M, Luchowski R, Grudzinski W, Gospodarek M, Gryczynski I, Gryczynski Z,  Dobrucki JW, Gruszecki WI. Light-induced isomerization of the LHCII-bound xanthophyll neoxanthin: possible implications for photoprotection in plants. Biochim Biophys Acta. 2011 Sep;1807(9):1237-43.
  327. Østrup O, Hyttel P, Klærke DA, Collas P. Remodeling of ribosomal genes in somatic cells by Xenopus egg extract. Biochem Biophys Res Commun. 2011 Sep 2;412(3):487-93.
Joint Publications 2010
  1. Badie, S. Escandell, JM. Bouwman, P. Carlos, AR. Thanasoula, M. Gallardo, MM. Suram, A. Jaco, I. Benitez, J. Herbig, U. Blasco, MA. Jonkers, J. Tarsounas, M. (2010). BRCA2 acts as a RAD51 loader to facilitate telomere replication and capping. Nat Struct Mol Biol. Dec;17(12):1461-9.
  2. Beck, H. Nähse, V. Larsen, MS. Groth, P. Clancy, T. Lees, M. Jørgensen, M. Helleday, T. Syljuåsen, RG. Sørensen, CS. (2010). Regulators of cyclin-dependent kinases are crucial for maintaining genome integrity in S phase. J Cell Biol. Mar 8;188(5):629-38.
  3. Beck, H. Menzel, T. Syljuåsen, RG. Sørensen, CS. (2010). High-throughput siRNA screens using gammaH2AX as marker uncover key regulators of genome integrity in mammalian cells. Cell Cycle. 2010 Jun 15;9(12):2257-8.
  4. Bouwman, P. Aly, A. Escandell, JM. Pieterse, M. Bartkova, J. van der Gulden, H. Hiddingh, S. Thanasoula, M. Kulkarni, A. Yang, Q. Haffty, BG. Tommiska, J. Blomqvist, C. Drapkin, R. Adams, DJ. Nevanlinna, H. Bartek, J. Tarsounas, M. Ganesan, S. Jonkers, J. (2010). 53BP1 loss rescues BRCA1 deficiency and is associated with triple-negative and BRCA-mutated breast cancers. Nat Struct Mol Biol. Jun;17(6):688-95.
  5. Björklund, MA. Vaahtomeri, K. Peltonen, K. Viollet, B. Mäkelä, TP. Band, AM. Laiho, M. (2010). Non-CDK-bound p27 (p27(NCDK)) is a marker for cell stress and is regulated through the Akt/PKB and AMPK-kinase pathways. Exp Cell Res. Mar 10;316(5):762-74.
  6. Campaner, S. Doni, M. Hydbring, P. Verrecchia, A. Bianchi, L. Sardella, D. Schleker, T. Perna, D. Tronnersjö, S. Murga, M. Fernandez-Capetillo, O. Barbacid, M. Larsson, LG. Amati, B. (2010). Cdk2 suppresses cellular senescence induced by the myc oncogene. Nat Cell Biol. Jan;12(1):54-9; sup pp 1-14.
  7. Duro, E. Lundin, C. Ask, K. Sanchez-Pulido, L. MacArtney, TJ. Toth, R. Ponting, CP. Groth, A.Helleday, T.Rouse, J. (2010). Identification of the MMS22L-TONSL complex that promotes homologous recombination. Mol Cell 40, pp. 632-44.
  8. Evers, B. Helleday, T. Jonkers, J. (2010). Targeting homologous recombination repair defects in cancer. Trends Pharmacol Sci. Aug;31(8):372-80.
  9. Landsverk, HB. Mora-Bermúdez, F. Landsverk, OJB. Hasvold, G. Naderi, D. Bakke, O. Ellenberg, J. Syljuåsen, RG. Collas, P. Küntziger, T. (2010). The protein phosphatase 1 regulator PNUTS is a new component of the DNA damage response. EMBO Rep. Nov;11(11):868-75.
  10. MacKay, C. Déclais, A. Lundin, C. Agostinho, A. Deans, A. MacArtney, T. Hofmann, K. Gartner, A. West, S. Helleday, T. Lilley, D. Rouse, J. (2010). Identification of KIAA1018/FAN1, a DNA repair nuclease recruited to DNA damage by monoubiquitinated FANCD2. Cell. Jul 9;142(1):65-76.
  11. Petersen, L. Hasvold, G. Lukas, J. Bartek, J. Syljuåsen, RG. (2010) p53-dependent G(1) arrest in 1st or 2nd cell cycle may protect human cancer cells from cell death after treatment with ionizing radiation and Chk1 inhibitors. Cell Prolif. Aug;43(4):365-71.
  12. Sarek, G. Järviluoma, A. Moore, H. Kurki, S. Vartia, S. Biberfeld, P. Laiho, M. Ojala, PM. (2010). Nucleophosmin phosphorylation by v-cyclin-CDK6 controls KSHV latency. PLoS Pathog. Mar 19;6(3):e1000818.
  13. Sørensen, CS. Melixetian, M. Klein, DK. Helin K. (2010). NEK11: linking CHK1and CDC25A in DNA damage checkpoint signaling. Cell Cycle. Feb 1;9(3):450-5.
  14. Tanenbaum, ME. Vallenius,T. Geers, EF. Greene, L. Mäkelä, TP. Medema, RH. (2010). Cyclin G-associated kinase promotes microtubule outgrowth from chromosomes during spindle assembly. Chromosoma. Aug;119(4):415-24.

Publications 2010

  1. Agaimy, A. Märkl, B. Arnholdt, H. Hartmann, A. Schneider-Stock, R. Chetty, R. (2010). Sporadic segmental Interstitial cell of cajal hyperplasia (microscopic GIST) with unusual diffuse longitudinal growth replacing the muscularis propria: differential diagnosis to hereditary GIST syndromes. Int J Clin Exp Pathol. May 31;3(5):549-56.
  2. Albert M, Helin K. (2010). Histone methyltransferases in cancer. Semin Cell Dev Biol. Apr;21(2):209-20.
  3. Alvarez-Fernández, M. Halim, VA. Krenning, L. Aprelia, M. Mohammed, S. Heck, AJ. Medema, RH. (2010). Recovery from a DNA-damage-induced G2 arrest requires Cdk-dependent activation of FoxM1. EMBO Rep. Jun;11(6):452-8.
  4. Alvarez-Fernandez, M. Medema, RH. (2010). A new role for Cdks in the DNA damage response. Cell Cycle. Aug 1;9(15):2915-6.
  5. Bailly, A. Gartner, A. (2010). C. elegans DNA damage responses in “Molecular Determinants of Radiation Response”. In press, to be published by Springer in 2010.
  6. Bailly, A. Freeman, A. Hall, J. Déclais, A. Alpi, A. Lilley, D. Ahmed, S. Gartner, A. (2010). The C. elegans homolog of Gen1/Yen1 resolvases links DNA damage signaling to DNA double-strand break repair. Plos Genetics. Jul 15;6(7):e1001025.
  7. Banković, J. Stojšić, J. Jovanović, D. Andjelković, T. Milinković, V. Ruždijić, S. Tanić, N.  (2010). Identification of genes associated with non-small-cell lung cancer promotion and progression. Lung Cancer. Feb;67(2):151-9.
  8. Barash, H. R Gross, E. Edrei, Y. Ella, E. Israel, A. Cohen, I. Corchia, N. Ben-Moshe, T. Pappo, O. Pikarsky, E. Goldenberg, D. Shiloh, Y. Galun, E. (2010). Abramovitch, R. Accelerated carcinogenesis following liver regeneration is associated with chronic inflammation-induced double-strand DNA breaks. Proc Natl Acad Sci U S A. Feb 2;107(5):2207-12.
  9. Barrand, S. Andersen, IS. Collas, P. (2010). Promoter-exon relationship of H3 lysine 9, 24, 36 and 79 methylation on pluripotency-associated genes. Biochem Biophys Res Commun. Oct 29;401(4):611-7.
  10. Barrand, S. Collas, P. (2010). Chromatin states of core pluripotency-associated genes in pluripotent, multipotent and differentiated cells. Biochem Biophys Res Commun. Jan 1;391(1):762-7.
  11. Bartek, J. Hamerlik, P. Lukas, J. (2010). On the origin of prostate fusion oncogenes. Nat Genet. Aug;42(8):647-8.
  12. Bartek, J. Lukas, J. (2010). The DNA damage response in tumorigenesis and cancer treatment. Nat. Rev. Cancer [nrc/posters/dnadamage/dna_poster.pdf]
  13. Bartkova, J. Hamerlik, P. Stockhausen, M. Ehrmann, J. Hlobilkova, A. Laursen, H. Kalita, O. Kolar, Z. Poulsen HS. Broholm, H. Lukas, J. Bartek, J. (2010). Replication stress and oxidative damage contribute to aberrant constitutive activation of DNA damage signalling in human gliomas. Oncogene. Sep 9;29(36):5095-102.
  14. Bartkova, J. Moudry, P. Hodny, Z. Lukas, J. Rajpert-De Meyts, E. Bartek, J. (2010). Heterochromatin marks HP1gamma, HP1alpha and H3K9me3, and DNA damage response activation in human testis development and germ cell tumours. Int J Androl. Jul 29. [Epub ahead of print]
  15. Bennetzen, M.V. Larsen, DH. Bunkenborg, J. Bartek, J. Lukas, J. Andersen, JS. (2010). Site-specific phosphorylation dynamics of the nuclear proteome during the DNA damage response. Mol Cell Proteomics. Jun;9(6):1314-23.
  16. Bergström, R. Savary, K. Morén, A. Guibert, S. Heldin, CH. Ohlsson, R. Moustakas, A. (2010). Transforming growth factor beta promotes complexes between Smad proteins and the CCCTC-binding factor on the H19 imprinting control region chromatin. J Biol Chem. Jun 25;285(26):19727-37.
  17. Bekker-Jensen, S. Rendtlew Danielsen, J. Fugger, K. Gromova, I. Nerstedt, A. Lukas, C. Bartek, J. Lukas, J. Mailand, N. (2010). HERC2 coordinates ubiquitin-dependent assembly of DNA repair factors on damaged chromosomes. Nat Cell Biol. Jan;12(1):80-6; sup pp 1-12.
  18. Bunting, SF. Callén, E. Wong, N. Chen, HT. Polato, F. Gunn, A. Bothmer, A. Feldhahn, N. Fernandez-Capetillo, O. Cao, L. Xu, X. Deng, CX. Finkel, T. Nussenzweig, M. Stark, JM. Nussenzweig, A. (2010). 53BP1 inhibits homologous recombination in Brca1-deficient cells by blocking resection of DNA breaks. Cell. Apr 16;141(2):243-54.
  19. Campaner, S. Doni, M. Verrechia, A. Fagà, G. Bianchi, L. Amati, B. (2010). Myc, Cdk2 and cellular senescence: old players, new game. Cell Cycle. Sep 15;9(18):3655-61.
  20. Cescutti, R. Negrini, S. Kohzaki, M. Halazonetis, TD. (2010). TopBP1 functions with 53BP1 in the G1 DNA damage checkpoint. EMBO J. Nov 3;29(21):3723-32.
  21. Choi, YS. Dusting, GJ. Stubbs, S. Arunothayaraj, S. Han, XL. Collas, P. Mossion, WA. Dilley, RL. (2010). Differentiation of human adipose-derived stem cells into beating cardiomyocytes. J Cell Mol Med. Apr;14(4):878-89.
  22. Christophersen, NS. Helin, K. (2010). Epigenetic control of embryonic stem cell fate. J Exp Med. Oct 25;207(11):2287-95.
  23. Cipak, A. Borovic, S. Jaganjac, M. Bresgen, N. Kirac, I. Grbesa, I. Mrakovcic, L. Cindric, M. Scukanec-Spoljar, M. Gall-Troselj, K. Coric, M. Eckl, P. Zarkovic, N. (2010). Influence of 4-hydroxynonenal and spleen cells on primary hepatocyte culture and a novel liver-derived cell line resembling hepatocyte stem cells. Acta Biochim Pol. 57(2):185-91.
  24. Collas, P. (2010). Programming differentiation potential in mesenchymal stem cells. Epigenetics. Aug 16;5(6):476-82.
  25. Collas, P. (2010). The current state of chromatin immunoprecipitation. Mol Biotechnol. May;45(1):87-100.
  26. Csepregi, A. Ebert, MP. Röcken, C. Schneider-Stock, R. Hoffmann, J. Schulz, HU. Roessner, A. Malfertheiner, P. (2010). Promoter methylation of CDKN2A and lack of p16 expression characterize patients with hepatocellular carcinoma. BMC Cancer. Jun 22;10:317.
  27. Cuadrado, A. Corrado, N. Perdiguero, E. Lafarga, V. Muñoz-Canoves, P. Nebreda, AR. (2010). Essential role of p18Hamlet/SRCAP-mediated histone H2A.Z chromatin incorporation in muscle differentiation. EMBO J. Jun 16;29(12):2014-25.
  28. Cuadrado, A. Nebreda, AR. (2010). Mechanisms and functions of p38 MAPK signaling. Biochem J. Aug 1;429(3):403-17.
  29. Dahl, JA. Reiner, AH. Klungland, A. Wakayama, T. Collas, P. (2010). Histone H3 lysine 27 methylation asymmetry on developmentally-regulated promoters distinguish the first two lineages in mouse preimplantation embryos. PLoS One. Feb 10;5(2):e9150.
  30. Delbarre, ED. Jacobsen, BM. Reiner, AH. Küntziger, T. Collas, P. (2010).  Chromatin environment of histone variant H3.3 revealed by integration of imaging and genome-scale chromatin and DNA immunoprecipitation. Mol Biol Cell. Jun 1;21(11):1872-84. Erratum in: Mol Biol Cell. 2010 Nov;21(21):3759.
  31. Di Fazio, P. Schneider-Stock, R. Neureiter, D. Okamoto, K. Wissniowski, T. Gahr, S. Quint, K. Meissnitzer, M. Alinger, B. Montalbano, R. Sass, G. Hohenstein, B. Hahn, EG. Ocker, M. (2010). The pan-deacetylase inhibitor panobinostat inhibits growth of hepatocellular carcinoma models by alternative pathways of apoptosis. Cell Oncol. Jan 1;32(4):285-300.
  32. Djouder, N. Tuerk, RD. Suter, M. Salvioni, P. Thali, RF. Scholz, R. Vaahtomeri, K. Auchli, Y. Rechsteiner, H. Brunisholz, RA. Viollet, B. Mäkelä, TP. Wallimann, T. Neumann, D. Krek, W. (2010). PKA phosphorylates and inactivates AMPKalpha to promote efficient lipolysis. EMBO J. Jan 20;29(2):469-81.
  33. Dreher, A. Rossing, M. Kaczkowski, B. Cilius Nielsen, F. Norrild, B. (2010). Differential expression of cellular microRNAs in HPV-11 transfected cells. An analysis by three different array platforms and qRT-PCR. Biochem Biophys Res Commun. Dec 17;403(3-4):357-62..
  34. Drewelus, I. Gopfert, C. Hippel, C. Dickmanns, A. Damianitsch, K. Pieler, T. Dobbelstein, M. (2010). p63 antagonizes Wnt-induced transcription. Cell Cycle. Feb 1;9(3):580-87.
  35. El-Najjar, N. Chatila, M. Moukadem, H. Vuorela, H. Ocker, M. Gandesiri, M. Schneider-Stock, R. Gali-Muhtasib, H. (2010). Reactive oxygen species mediate thymoquinone-induced apoptosis and activate ERK and JNK signaling. Apoptosis. Feb;15(2):183-95.
  36. Ercegovac, M. Jovic, N. Simic, T. Beslac-Bumbasirevic, L. Sokic, D. Djukic, T. Savic-Radojevic, A. Matic, M. Mimic-Oka, J. Pljesa-Ercegovac, M. (2010). Byproducts of protein, lipid and DNA oxidative damage and antioxidant enzyme activities in seizure. Seizure. May;19(4):205-10.
  37. Erikstein, BS. Hagland, HR. Nikolaisen, J. Kulawiec, M. Singh, KK. Gjertsen, BT. Tronstad, KJ. (2010). Cellular stress induced by resazurin leads to autophagy and cell death via production of reactive oxygen species and mitochondrial impairment. J Cell Biochem. Oct 15;111(3):574-84.
  38. Ersvaer, E. Liseth, K. Skavland, J. Gjertsen, BT. Bruserud, Ø. (2010). Intensive chemotherapy for acute myeloid leukemia differentially affects circulating TC1, TH1, TH17 and TREG cells. BMC Immunol. Jul 9;11:38.
  39. Farnebo, M. Bykov, VJ. Wiman, KG. (2010). The p53 tumor suppressor: a master regulator of diverse cellular processes and therapeutic target in cancer. Biochem Biophys Res Commun. May 21;396(1):85-9.
  40. Farrar, D. Rai, S. Chernukhin, I. Jagodic, M. Ito, Y. Yammine, S. Ohlsson, R. Murrell, A. Klenova, E. (2010). Mutational analysis of the poly(ADP-ribosyl)ation sites of the transcription factor CTCF provides an insight into the mechanism of its regulation by poly(ADP-ribosyl)ation. Mol Cell Biol. Mar;30(5):1199-216.
  41. Fensgård, Ø. Kassahun, H. Bombik, I. Rognes, T. Lindvall, J. Nilsen, H. (2010). A two-tiered compensatory response to loss of DNA repair modulates aging and stress response pathways. Aging (Albany NY). Mar 31;2(3):133-59.
  42. Fernandez-Capetillo, O. Intrauterine programming of ageing. EMBO Rep. 2010 Jan;11(1):32-6. Epub 2009 Dec 11.
  43. Ferreiro, F. Joaquin, M. Islam, K. Gomez, G. Barragan, M. Lombardía, L. Domínguez, O. Pisano, DG. Lopez-Bigas, N. Nebreda, AR. Posas, F. (2010). Whole genome analysis of p38 SAPK-mediated gene expression upon stress. BMC Genomics. Mar 1;11:144.
  44. Fredly, H. Stapnes Bjørnsen, C. Gjertsen, BT. Bruserud. Ø. (2010). Combination of the histone deacetylase inhibitor valproic acid with oral hydroxyurea or 6-mercaptopurin can be safe and effective in patients with advanced acute myeloid leukaemia – a report of five cases. Hematology. Oct;15(5):338-43.
  45. Gall-Troselj, K. Novak Kujundzic, R. (2010). Epigenomics – A Bird’s Eye Perspective on the Genome. Periodicum biologorum 112(4):411-418.
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  143. Polo, SE. Kaidi, A. Baskcomb, L. Galanty, Y. Jackson, SP. (2010). Regulation of DNA-damage responses and cell-cycle progression by the chromatin remodelling factor CHD4. EMBO J. Sep 15;29(18):3130-9.
  144. Rennstam, K. Ringberg, A. Cunliffe, HE. Olsson, H. Landberg, G. Hedenfalk, I. (2010). Genomic alterations in histopathologically normal breast tissue from BRCA1 mutation carriers may be caused by BRCA1 haploinsufficiency. Genes Chromosomes Cancer. Jan;49(1):78-90.
  145. Ruiz, EJ. Vilar, M. Nebreda, AR. (2010). A two-step inactivation mechanism of Myt1 ensures CDK1/cyclin B activation and meiosis I entry. Curr Biol. Mar 31. [Epub ahead of print]
  146. Rutkowski, R. Hofmann, K. Gartner, A. (2010). Phylogeny and Function of the Invertebrate p53 Superfamily. Cold Spring Harb Perspect Biol. Jul 1;2(7):a001131.
  147. Rutkowski, R. Gartner, A. (2010). Tagging the dead a bridging factor for Caenorhabditis elegans phagocyte receptors. Nature Cell Biol. Jul; 12(7) 638-640.
  148. Rökaeus, N. Shen, J. Eckhardt, I. Bykov, VJ. Wiman, KG. Wilhelm, MT. (2010). PRIMA-1(MET)/APR-246 targets mutant forms of p53 family members p63 and p73. Oncogene. Dec 9;29(49):6442-51.
  149. Semaeva, E. Tenstad, O. Skavland, J. Enger, M. Iversen, PO. Gjertsen, BT. Wiig, H. (2010). Access to the spleen microenvironment through lymph shows local cytokine production, increased cell flux, and altered signaling of immune cells during lipopolysaccharide-induced acute inflammation. J Immunol. Apr 15;184(8):4547-56.
  150. Sand, SL. Oppegård, C. Ohara, S. Iijima, T. Naderi, S. Blomhoff, HK. Nissen-Meyer, J. Sand, O. (2010). Plantaricin A, a peptide pheromone produced by Lactobacillus plantarum, permeabilizes the cell membrane of both normal and cancerous lymphocytes and neuronal cells. Peptides. Jul;31(7):1237-44.
  151. Santamaria, PG. Nebreda, AR. (2010). Deconstructing ERK signaling in tumorigenesis. Mol Cell. Apr 9;38(1):3-5.
  152. Santos, MA. Huen, MS. Jankovic, M. Chen, HT. López-Contreras, AJ. Klein, IA. Wong, N. Barbancho, JL. Fernandez-Capetillo, O. Nussenzweig, MC. Chen, J. Nussenzweig, A. (2010). Class switching and meiotic defects in mice lacking the E3 ubiquitin ligase RNF8.J Exp Med. May 10;207(5):973-81.
  153. Sarek, G. Ojala, PM. (2010). Restoration of p53 function by MDM2 inhibition as a promising treatment modality for KSHV-associated malignancies. In “Molecular Basis for Therapy of AIDS-Defining Cancers”. Springer. Ed. Dittmer, D. Krown, S. 1st edition, pp. 167-180.
  154. Selivanova, G. (2010). Therapeutic targeting of p53 by small molecules. Semin Cancer Biol. 2010 Feb;20(1):46-56.
  155. Semczuk, A. Schneider-Stock, R. Szewczuk, W. (2010). Prevalence of allelic loss at TP53 in endometrial carcinomas. Oncology. 78(3-4):220-8.
  156. Sevimli-Gur, C. Akgun, IH. Deliloglu-Gurhan, I. Korkmaz, KS. Bedir, E. (2010). Cytotoxic naphthoquinones from Alkanna cappadocica (perpendicular). J Nat Prod. May 28;73(5):860-4.
  157. Skjeldam, HK. Kassahun, H. Fensgård, O. SenGupta, T. Babaie, E. Lindvall, JM. Arczewska, K. Nilsen H. (2010). Loss of Caenorhabditis elegans UNG-1 uracil-DNA glycosylase affects apoptosis in response to DNA damaging agents. DNA Repair (Amst). Aug 5;9(8):861-70.
  158. Soutto, M. Peng, D. Razvi, M. Ruemmele, P. Hartmann, A. Roessner, A. Schneider-Stock, R. El-Rifai, W. (2010). Epigenetic and genetic silencing of CHFR in esophageal adenocarcinomas. Cancer. Sep 1;116(17):4033-42.
  159. Splinter, D. Tanenbaum, ME. Lindqvist, A. Jaarsma, D. Flotho, A. Yu, KL. Grigoriev, I. Engelsma, D. Haasdijk, ED. Keijzer, N. Demmers, J. Fornerod, M. Melchior, F. Hoogenraad, CC. Medema, RH. Akhmanova, A. (2010). Bicaudal D2, dynein, and kinesin-1 associate with nuclear pore complexes and regulate centrosome and nuclear positioning during mitotic entry. PLoS Biol. Apr 6;8(4):e1000350.
  160. Stendahl, M. Nilsson, S. Wigerup, C. Jirström, K. Jönsson, PE. Stål, O. Landberg, G. (2010). p27Kip1 is a predictive factor for tamoxifen treatment response but not a prognostic marker in premenopausal breast cancer patients. Int J Cancer. Dec 15;127(12):2851-8. doi: 10.1002/ijc.25297.
  161. Ström, CE. Johansson, F. Uhlén, M. Al-Khalili Szigyarto, C. Erixon, K. Helleday, T. (2010). Poly (ADP-ribose) polymerase (PARP) is not involved in base excision repair but PARP inhibition traps a single-strand intermediate. Nucleic Acids Res. Dec 22. [Epub ahead of print]
  162. Sulg, M. Kirjavainen, A. Pajusola, K. Bueler, H. Ylikoski, J. Laiho, M. Pirvola, U. (2010). Differential sensitivity of the inner ear sensory cell populations to forced cell cycle re-entry and p53 induction. J Neurochem. 2010 Mar;112(6):1513-26.
  163. Sumida N, Ohlsson R. (2010). Chromosomal networks as mediators of epigenetic states: the maternal genome connection. Epigenetics. May 16;5(4):297-300.
  164. Sørensen, AL. Reiner, AH. Jacobsen, BM. Collas, P. (2010). Promoter DNA methylation patterns of differentiated cells are largely programmed at the progenitor stage. Mol Biol Cell. Jun 15;21(12):2066-77.
  165. Sørensen, AL. West, FD. Vekterud, K. Ährlund-Richter, L. Stice, SL. Collas, P. (2010). Lineage-specific promoter DNA methylation patterns segregates adult progenitor cell types. Stem Cells Dev. Aug;19(8):1257-66.
  166. Talos, F. Wolff, S. Beyer, U. Dobbelstein, M. Moll, UM. (2010). Brdm2 - an aberrant hypomorphic p63 allele. Cell Death Differ. Jan;17(1):184-186.
  167. Talos, F. Abraham, A. Vaseva, AV. Holembowski, L. Tsirka, SE. Scheel, A. Bode, D. Dobbelstein, M. Bruck, W. Moll, UM. (2010). p73 is an essential regulator of neural stem cell maintenance in embryonal and adult CNS neurogenesis. Cell Death Differ. Dec;17(12):1816-29.
  168. Tanenbaum, ME. Akhmanova, A. Medema, RH. (2010). Dynein at the nuclear envelope. EMBO Rep. Sep;11(9):649.
  169. Tanenbaum, ME. Medema, RH. (2010). Mechanisms of centrosome separation and bipolar spindle assembly. Dev Cell. Dec 14;19(6):797-806.
  170. Tasic, V. Gucev, Z. (2010). Dent disease. World J Pediatr. In print.
  171. Tejera, AM. Stagno d´Alcontres, M. Thanasoula, M. Martinez, P. Liao, C. Tarsounas, M. Blasco, MA. (2010). TPP1 is required for TERT recruitment, telomere elongation during nuclear reprogramming, and normal skin development in mice. Dev Cell. May 18;18(5):775-89.
  172. Thanasoula, M. Escandell, JM. Martinez, P. Badie, S. Muñoz, P. Blasco, MA. Tarsounas, M. (2010). p53 prevents entry into mitosis with uncapped telomeres. Curr Biol. Mar 23;20(6):521-6.
  173. Tihanyi, B. Vellai, T. Regos, A. Ari, E. Müller, F. Takács-Vellai, K. (2010). The C. elegans Hox gene ceh-13 regulates cell migration and fusion in a non-colinear way. Implications for the early evolution of Hox clusters. BMC Dev Biol. Jul 28;10:78.
  174. Toh, GW. Sugawara, N. Dong, J. Toth, R. Lee, SE. Haber, JE. and Rouse, J. (2010). Mec1/Tel1-dependent phosphorylation of Slx4 stimulates Rad1-Rad10-dependent cleavage of non-homologous DNA tails. DNA Repair (Amst) 9, pp. 718-26.
  175. Trembecka, DO. Kuzak, M. Dobrucki, JW. (2010). Conditions for using FRAP as a quantitative technique--influence of the bleaching protocol. Cytometry A. Apr;77(4):366-70.
  176. Trougakos, IP. Chondrogianni, N. Amarantos, I. Blake, J. Schwager, C. Wirkner, U. Ansorge, W. Gonos, ES. (2010). Genome-wide transcriptome profile of the human osteosarcoma Sa OS and U-2 OS cell lines. Cancer Genet Cytogenet. Jan 15;196(2):109-18.
  177. Tvorogov, D. Anisimov, A. Zheng, W. Leppänen, V-M. Tammela, T. Laurinavicius, S. Holnthoner, W. Heloterä, H. Holopainen, T. Jeltsch, M. Kalkkinen, N. Lankinen, H. Ojala, PM. Alitalo, K. (2010). Effective suppression of vascular network formation by combination of antibodies blocking VEGFR ligand binding and receptor dimerization. Cancer Cell. 2010 Dec 14;18(6):630-40.
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2009

Joint publications

  1. Cuadrado M, Gutierrez-Martinez P, Aneta S, Nebreda AR, Fernandez-Capetillo O (2009) p27kip1 stabilization is essential for the maintenance of cell cycle arrest in response to DNA damage.Cancer Res. 69: 8726-8732.
  2. Enge M, Bao W, Hedström E, Jackson SP, Moumen A, Selivanova G (2009) MDM2-dependent downregulation of p21 and hnRNPK provides a switch between apoptosis and growth arrest induced by pharmacologically reactivated p53. Cancer Cell 15: 171-183.
  3. Lafarga V, Cuadrado A, Lopez de Silanes I, Bengoechea R, Fernandez-Capetillo O, Nebreda AR (2009) p38 Mitogen-activated protein kinase- and HuR-dependent stabilization of p21(Cip1) mRNA mediates the G(1)/S checkpoint. Mol Cell Biol. 29: 4341-4351.
  4. Martinez P, Thanasoula M, Munoz P, Liao C, Tejera A, McNees C, Flores JM, Fernandez-Capetillo O, Tarsounas M, Blasco MA (2009) Increased telomere fragility and fusions resulting from TRF1 deficiency lead to degenerative pathologies and increased cancer in mice. Genes Dev. 23: 2060-2075.
  5. Melixetian M, Klein DK, Sørensen CS, Helin K (2009) NEK11 regulates CDC25A degradation and the IR-induced G2/M checkpoint. Nat Cell Biol. 11:1247-1253.
  6. Vilborg A, Glahder JA, Wilhelm MT, Corcoran M, Mahmoudi S, Rosenstierne M, Bersani C, Grandér D, Farnebo M, Norrild B, Wiman KG (2009) The p53 target Wig-1 regulates p53 mRNA stability through an AU-rich element. PNAS 106: 15756-15761.

Publications

  1. Agger K, Cloos PA, Rudkjaer L, Williams K, Andersen G, Christensen J, Helin K (2009) The H3K27me3 demethylase JMJD3 contributes to the activation of the INK4A-ARF locus in response to oncogene- and stress-induced senescence. Genes Dev. 23: 1171-1176.
  2. Ahel D, Horejsi Z, Wiechens N, Polo SE, Garcia-Wilson E, Ahel I, Flynn H, Skehel M, West SC, Jackson SP, Owen-Hughes T, Boulton SJ (2009) Poly(ADP-ribose)-Dependent Regulation of DNA Repair by the Chromatin Remodeling Enzyme ALC1. Science 325: 1240-1243.
  3. Al-Minawi AA, Lee Y-F, Johansson F, Håkansson D, Lundin C, Saleh-Gohari N, Schultz N, Jenssen D, Hinz JM, Helleday T (2009) The ERCC1/XPF endonuclease is required for completion of homologous recombination at interstrand crosslink-stalled replication forks. Nucleic Acids Res. 37: 6400-6413.
  4. Badie S, Liao C, Thanasoula M, Barber P, Hill M, Tarsounas M (2009) RAD51C facilitates checkpoint signalling by promoting CHK2 phosphorylation. J Cell Biol. 185: 587-600.
  5. Bajbouj K, Poehlmann A, Kuester D, Drewes T, Haase K, Hartig R, Teller A, Kliche S, Walluscheck D, Ivanovska J, Chakilam S, Ulitzsch A, Bommhardt U, Leverkus M, Roessner A, Schneider-Stock R (2009) Identification of phosphorylated p38 as a novel DAPK-interacting partner during TNFalpha-induced apoptosis in colorectal tumor cells. Am J Pathol. 175: 557-570.
  6. Balantinou E, Trougakos IP, Chondrogianni N, Margaritis LH, Gonos ES (2009) Transcriptional and posttranslational regulation of clusterin by the two main cellular proteolytic pathways. Free Rad Biol Med. 46: 1267-1274.
  7. Band A, Björklund M, Laiho M (2009) Phosphatidylinositol 3-kinase/Akt pathway regulates transforming growth factor-ß signaling by de-stabilizing Ski and inducing Smad7. J Biol Chem. 284: 35441-35449.
  8. Bentires-Alj M, Clarke RB, Jonkers J, Smalley M, Stein T (2009) It's all in the details: methods in breast development and cancer. Breast Cancer Res. 11: 305.
  9. Bereshchenko O, Mancini E, Moore S, Bilbao D, Månsson R, Luc S, Grover A, Jacobsen SE, Bryder D, Nerlov C (2009) Hematopoietic stem cell expansion precedes the generation of committed myeloid leukemia-initiating cells in C/EBPalpha mutant AML. Cancer Cell 16: 390-400.
  10. Bilitou A, Watson J, Gartner A, Ohnuma S (2009) The NM23 family in development. Mol Cell Biochem. 329: 17-33.
  11. Borgquist S, Jirström K, Anagnostaki L, Manjer J, Landberg G (2009) Anthropometric factors in relation to different tumor biological subgroups of postmenopausal breast cancer. Int J Cancer 124: 402-411.
  12. Borsy A, Podani J, Stéger V, Balla B, Horváth A, Kósa JP, Gyurján I Jr, Molnár A, Szabolcsi Z, Szabó L, Jakó E, Zomborszky Z, Nagy J, Semsey S, Vellai T, Lakatos P, Orosz L (2009) Identifying novel genes involved in both deer physiological and human pathological osteoporosis. Mol Genet Genomics 281: 301-313.
  13. Brandberg Y, Hansson J, Ingvar C, Kiessling R, Månsson-Brahme E, Wennberg AM, Wiman K (2009) "Melanom. Sol, skugga och vår hud." Karolinska Institutet University Press.
  14. Bryant HE, Petermann E, Schultz N, Jemth AS, Loseva O, Issaeva N, Johansson F, Fernandez S, McGlynn P, Helleday T (2009) PARP is activated at stalled forks to mediate Mre11-dependent replication restart and recombination. EMBO J. 28: 2601-2615.
  15. Bua DJ, Kuo AJ, Cheung P, Liu CL, Migliori V, Espejo A, Casadio F, Bassi C, Amati B, Bedford MT, Guccione E, Gozani O (2009) Epigenome microarray platform for proteome-wide dissection of chromatin-signaling networks. PLoS One 4: e6789.
  16. Bykov VJN, Lambert JMR, Hainaut P, Wiman KG (2009)Mutant p53 rescue and modulation of p53 redox state. Cell Cycle 8: 2509-2517.
  17. Campaner S, Doni M, Hydbring P, Verrecchia A, Bianchi L, Sardella D, Schleker T, Perna D, Tronnersjö S, Murga M, Fernandez-Capetillo O, Barbacid M, Larsson LG, Amati B (2009) Cdk2 suppresses cellular senescence induced by the c-myc oncogene. Nat Cell Biol. 12: 54-59.
  18. Cerqueira A, Santamaría D, Martínez-Pastor B, Cuadrado M, Fernández-Capetillo O, Barbacid M (2009) Overall Cdk activity modulates the DNA damage response in mammalian cells. J Cell Biol. 187: 773-80.
  19. Chakraborty A, Ferk F, Simić T, Brantner A, Dusinská M, Kundi M, Hoelzl C, Nersesyan A, Knasmüller S (2009) DNA-protective effects of sumach (Rhus coriaria L.), a common spice: results of human and animal studies. Mutat Res. 661: 10-17.
  20. Cheng F, Weidner-Glunde M, Varjosalo M, Rainio EM, Lehtonen A, Schulz TF, Koskinen PJ, Taipale J, Ojala PM (2009) KSHV reactivation from latency requires Pim-1 and Pim-3 kinases to inactivate the latency-associated nuclear antigen LANA. PLoS Pathog. 5: e1000324.
  21. Collas P (2009) Epigenetic states in stem cells. Biochem Biophys Acta. 1790: 900-905.
  22. Collas P (2009) The state-of-the-art of chromatin immunoprecipitation. Meth Mol Biol. 567: 1-25.
  23. Côme C, Laine A, Chanrion M, Edgren H, Mattila E, Liu X, Jonkers J, Ivaska J, Isola J, Darbon JM, Kallioniemi O, Thézenas S, Westermarck J (2009) CIP2A is associated with human breast cancer aggressivity. Clin Cancer Res. 15: 5092-5100.
  24. Cuenda A, Nebreda AR (2009) Preview - p38d and PDK1: kinase switches for insulin secretion. Cell 136: 209-210.
  25. Dahl JA, Collas P (2009) ChIP: immunoprecipitation for small cell numbers. Meth Mol Biol. 567: 59-74.
  26. Dahl JA, Reiner AH, Collas P (2009) Fast genomic muChIP-chip from 1,000 cells. Genome Biol. 10: R13.
  27. de Visser K, Jonkers J (2009) Towards Understanding the Role of Cancer-Associated Inflammation in chemoresistance. Curr Pharm Des. 15: 1844-1853
  28. Dinarina A, Santamaría PG, Nebreda AR (2009) Cell cycle regulation of the mammalian CDK activator RINGO/Speedy A. FEBS Lett. 583: 2772-2778.
  29. Doil C, Mailand N, Bekker-Jensen S, Menard P, Larsen DH, Pepperkok R, Ellenberg J, Panier S, Durocher D, Bartek J, Lukas J, Lukas C (2009) RNF168 binds and amplifies ubiquitin conjugates on damaged chromosomes to allow accumulation of repair proteins. Cell 136: 435-446.
  30. Drost R, Jonkers J (2009) Preclinical mouse models for BRCA1-associated breast cancer. Br J Cancer 101: 1651-1657.
  31. Efeyan A, Murga M, Martinez-Pastor B, Ortega-Molina A, Soria R, Collado M, Fernandez-Capetillo O, Serrano M (2009) Limited role of murine ATM in oncogene-induced senescence and p53-dependent tumor suppression. PLoS One 4: e5475.
  32. Emamzadah S, Petty TJ, De Almeida V, Nishimura T, Joly J, Ferrer JL, Halazonetis TD (2009) Cyclic olefin homopolymer-based microfluidics for protein crystallization and in situ X-ray diffraction. Acta Crystallogr D Biol Crystallogr. 65: 913-920.
  33. Engedal N, Auberger P, Blomhoff HK (2009) Retinoic acid regulates Fas-induced apoptosis in Jurkat T cells. J Leuc Biol. 85: 469-480.
  34. Ertesvåg Å, Austenaa L, Carlsen H, Blomhoff R, Blomhoff HK (2009) Retinoic acid inhibits IL-2 gene activity and T cell activation in mice. Immunology 126: 514-522.
  35. Ertesvåg Å, Naderi S, Blomhoff HK (2009) Regulation of B cell proliferation and differentiation by retinoic acid. Semin Immunol. 21: 36-41.
  36. Evers B, Schut E, van der Burg E, Braumuller TM, Egan DA, Holstege H, Edser P, Adams DJ, Wade-Martins R, Bouwman P, Jonkers J (2009) A high-throughput pharmaceutical screen identifies compounds with specific toxicity against BRCA2-deficient tumors. Clin Cancer Res. 16: 99-108.
  37. Faustrup H, Bekker-Jensen S, Bartek J, Lukas J, Mailand N (2009) USP7 counteracts SCFbetaTrCP- but not APCCdh1-mediated proteolysis of Claspin. J Cell Biol. 184: 13-19.
  38. Fugger K, Mistrik M, Danielsen JR, Dinant C, Falck J, Bartek J, Lukas J, Mailand N (2009) Human Fbh1 helicase contributes to genome maintenance via pro- and anti-recombinase activities. J Cell Biol. 186: 655-663.
  39. Galanty Y, Belotserkovskaya R, Coates J, Polo S, Miller KM, Jackson SP (2009) Mammalian SUMO E3-ligases PIAS1 and PIAS4 promote responses to DNA double-strand breaks. Nature 462: 935-939.
  40. Gerasimaitė R, Vilkaitis G, Klimašauskas S (2009) A directed evolution design of a GCG-specific DNA hemimethylase. Nucleic Acids Res. 37: 7332-7341.
  41. Git A, Allison R, Perdiguero E, Nebreda AR, Houliston E, Standart N (2009) Vg1RBP phosphorylation by Erk2 MAP kinase correlates with the cortical release of Vg1 mRNA during meiotic maturation of Xenopus oocytes. RNA 15: 1121-1133.
  42. Göndör A, Ohlsson R (2009) Chromatin crosstalk in three dimensions Nature 461: 212-217.
  43. Göndör A, Ohlsson R (2009) Replication timing and epigenetic reprogramming of gene expression: atwo-way relationship? Nat Rev Genet. 10: 269-276.
  44. Gonos ES, Trougakos IP, Chondrogianni N (2009) Aging Research in Greece. In: Palmore, E., Whitington, F. and Kunkel, S. (eds), pp 249-257: International Handbook of Aging. Praeger Publishers, Connecticat, USA.
  45. Gottipati P, Helleday T. (2009) Transcription-associated recombination in eukaryotes: link between transcription, replication and recombination. Mutagenesis 24: 203-210.
  46. Greiss S, Gartner A (2009) Sirtuin phylogeny and structural conservation. Mol Cells 28: 407-415.
  47. Grinkevich V, Nikulenkov F, Shi Y, Enge M, Bao W, Maljukova A, Gluch A, Kel A, Sangfelt O, Selivanova G (2009) Ablation of key oncogenic pathways by RITA-reactivated p53 is required for efficient apoptosis. Cancer Cell 15: 441-53.
  48. Gucev Z, Pop-Jordanova N, Dumalovska G, Stomnaroska O, Zafirovski G, Tasic VB (2009) Arthrogryposis multiplex congenital (AMC) in a three year old boy: differential diagnosis with distal arthrogryposis: a case report. Cases J. 2: 9403.
  49. Gucev Z, Tasic V, Jancevska A, Jordanova NP, Koceva S, Kuturec M, Sabolic V (2009) Friedreich's ataxia (FA) associated with diabetes mellitus type 1 and hypertrophic cardiomyopathy: analysis of a FA family. Med Arh. 63: 110-111.
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2008  

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